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Beyond crosswalks: reliability of exposure assessment following automated coding of free-text job descriptions for occupational epidemiology
Journal article   Open access

Beyond crosswalks: reliability of exposure assessment following automated coding of free-text job descriptions for occupational epidemiology

Igor Burstyn, Anton Slutsky, Derrick G Lee, Alison B Singer, Yuan An and Yvonne L Michael
The Annals of occupational hygiene, v 58(4), pp 482-492
May 2014
PMID: 24504175
url
https://doi.org/10.1093/annhyg/meu006View
Published, Version of Record (VoR) Open

Abstract

Reproducibility of Results Automatic Data Processing - methods Humans Middle Aged Male Job Description Pregnancy Algorithms Occupational Exposure - analysis Epidemiologic Methods Coal Tar Occupations - classification Adult Female Aged Asthma, Occupational
Epidemiologists typically collect narrative descriptions of occupational histories because these are less prone than self-reported exposures to recall bias of exposure to a specific hazard. However, the task of coding these narratives can be daunting and prohibitively time-consuming in some settings. The aim of this manuscript is to evaluate the performance of a computer algorithm to translate the narrative description of occupational codes into standard classification of jobs (2010 Standard Occupational Classification) in an epidemiological context. The fundamental question we address is whether exposure assignment resulting from manual (presumed gold standard) coding of the narratives is materially different from that arising from the application of automated coding. We pursued our work through three motivating examples: assessment of physical demands in Women's Health Initiative observational study, evaluation of predictors of exposure to coal tar pitch volatiles in the US Occupational Safety and Health Administration's (OSHA) Integrated Management Information System, and assessment of exposure to agents known to cause occupational asthma in a pregnancy cohort. In these diverse settings, we demonstrate that automated coding of occupations results in assignment of exposures that are in reasonable agreement with results that can be obtained through manual coding. The correlation between physical demand scores based on manual and automated job classification schemes was reasonable (r = 0.5). The agreement between predictive probability of exceeding the OSHA's permissible exposure level for polycyclic aromatic hydrocarbons, using coal tar pitch volatiles as a surrogate, based on manual and automated coding of jobs was modest (Kendall rank correlation = 0.29). In the case of binary assignment of exposure to asthmagens, we observed that fair to excellent agreement in classifications can be reached, depending on presence of ambiguity in assigned job classification (κ = 0.5-0.8). Thus, the success of automated coding appears to depend on the setting and type of exposure that is being assessed. Our overall recommendation is that automated translation of short narrative descriptions of jobs for exposure assessment is feasible in some settings and essential for large cohorts, especially if combined with manual coding to both assess reliability of coding and to further refine the coding algorithm.

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Collaboration types
Domestic collaboration
International collaboration
Web of Science research areas
Public, Environmental & Occupational Health
Toxicology
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