Design, Synthesis and Structure—Activity Relationships of Phenylalanine-Containing Peptidomimetics as Novel HIV-1 Capsid Binders Based on Ugi Four-Component Reaction
Xiangkai Ji, Jing Li, Prem Sharma, Xiangyi Jiang, Brijesh Rathi, Zhen Gao, Lide Hu, Dongwei Kang, Erik De Clercq, Simon Cocklin, …
Published, Version of Record (VoR)CC BY V4.0, Open
Abstract
Acids Acquired immune deficiency syndrome AIDS Antiviral activity Binders Binding Binding sites Carbon Cytotoxicity Drug resistance HIV Human immunodeficiency virus Hydrogen bonds Immune system Life cycles Metabolism Molecular docking Molecular dynamics Nevirapine Peptidomimetics Phenylalanine Proteins Selectivity Surface plasmon resonance Toxicity
As a key structural protein, HIV capsid (CA) protein plays multiple roles in the HIV life cycle, and is considered a promising target for anti-HIV treatment. Based on the structural information of CA modulator PF-74 bound to HIV-1 CA hexamer, 18 novel phenylalanine derivatives were synthesized via the Ugi four-component reaction. In vitro anti-HIV activity assays showed that most compounds exhibited low-micromolar-inhibitory potency against HIV. Among them, compound I-19 exhibited the best anti-HIV-1 activity (EC50 = 2.53 ± 0.84 μM, CC50 = 107.61 ± 27.43 μM). In addition, I-14 displayed excellent HIV-2 inhibitory activity (EC50 = 2.30 ± 0.11 μM, CC50 > 189.32 μM) with relatively low cytotoxicity, being more potent than that of the approved drug nevirapine (EC50 > 15.02 μM, CC50 > 15.2 μM). Additionally, surface plasmon resonance (SPR) binding assays demonstrated direct binding to the HIV CA protein. Moreover, molecular docking and molecular dynamics simulations provided additional information on the binding mode of I-19 to HIV-1 CA. In summary, we further explored the structure—activity relationships (SARs) and selectivity of anti-HIV-1/HIV-2 of PF-74 derivatives, which is conducive to discovering efficient anti-HIV drugs.
Design, Synthesis and Structure—Activity Relationships of Phenylalanine-Containing Peptidomimetics as Novel HIV-1 Capsid Binders Based on Ugi Four-Component Reaction
Creators
Xiangkai Ji - Shandong University
Jing Li
Prem Sharma
Xiangyi Jiang
Brijesh Rathi
Zhen Gao
Lide Hu
Dongwei Kang
Erik De Clercq
Simon Cocklin
Chuanfeng Liu
Christophe Pannecouque
Alexej Dick
Jingjing Li - Urban Health Collaborative (2015-)
Xinyong Liu
Peng Zhan
Publication Details
Molecules (Basel, Switzerland), v 27(18), p5995
Publisher
MDPI AG
Resource Type
Journal article
Language
English
Academic Unit
Biochemistry and Molecular Biology; Urban Health Collaborative
Web of Science ID
WOS:000857716700001
Scopus ID
2-s2.0-85138325738
Other Identifier
991019173531304721
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Collaboration types
Domestic collaboration
International collaboration
Web of Science research areas
Biochemistry & Molecular Biology
Chemistry, Multidisciplinary
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