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Newly developed SNP markers related to genes for leaf morphological traits and disease resistance in Chinese cabbage (Brassica rapa L. ssp. pekinensis)
Journal article   Peer reviewed

Newly developed SNP markers related to genes for leaf morphological traits and disease resistance in Chinese cabbage (Brassica rapa L. ssp. pekinensis)

Yul-Kyun Ahn, Young-Il Cho, Swati Tripathi, Do-Sun Kim, Jeong-Ho Kim and Hye-Eun Lee
Plant genetic resources: characterization and utilization, v 12(S1), pp S62-S64
01 Jul 2014
DOI: https://doi.org/10.1017/S1479262114000288
Featured in Collection :   UN Sustainable Development Goals @ Drexel

Abstract

Genetics & Heredity Life Sciences & Biomedicine Plant Sciences Science & Technology
Based on the sequences of Brassica rapa ssp. pekinensis, we carried out a single-nucleotide polymorphism (SNP) study for genes controlling disease resistance (clubroot, turnip mosaic virus and soft rot) and leaf traits in B. rapa leafy genotypes 'VC40' and 'SR5'. In total, 7645 SNP markers were obtained based on the annotation of a B. rapa database for disease resistance. Among these 7645 SNP markers, 141 were related to 125 genes linked to leaf traits. From these 141 SNP markers, 63 were screened and High Resolution Melt (HRM) primers were designed for genomic studies. A total of 20 polymorphic SNP primers were finally obtained. Eventually, these markers will be further used for the detection of quantitative trait loci and mapping studies.

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2 citations in Web of Science
3 citations in Scopus

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UN Sustainable Development Goals (SDGs)

This publication has contributed to the advancement of the following goals:

#13 Climate Action
#15 Life on Land

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Collaboration types
Domestic collaboration
Web of Science research areas
Genetics & Heredity
Plant Sciences
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