PremisePteridophytes-vascular land plants that disperse by spores-are a powerful system for studying plant evolution, particularly with respect to the impact of abiotic factors on evolutionary trajectories through deep time. However, our ability to use pteridophytes to investigate such questions-or to capitalize on the ecological and conservation-related applications of the group-has been impaired by the relative isolation of the neo- and paleobotanical research communities and by the absence of large-scale biodiversity data sources. MethodsHere we present the Pteridophyte Collections Consortium (PCC), an interdisciplinary community uniting neo- and paleobotanists, and the associated PteridoPortal, a publicly accessible online portal that serves over three million pteridophyte records, including herbarium specimens, paleontological museum specimens, and iNaturalist observations. We demonstrate the utility of the PteridoPortal through discussion of three example PteridoPortal-enabled research projects. ResultsThe data within the PteridoPortal are global in scope and are queryable in a flexible manner. The PteridoPortal contains a taxonomic thesaurus (a digital version of a Linnaean classification) that includes both extant and extinct pteridophytes in a common phylogenetic framework. The PteridoPortal allows applications such as greatly accelerated classic floristics, entirely new "next-generation" floristic approaches, and the study of environmentally mediated evolution of functional morphology across deep time. DiscussionThe PCC and PteridoPortal provide a comprehensive resource enabling novel research into plant evolution, ecology, and conservation across deep time, facilitating rapid floristic analyses and other biodiversity-related investigations, and providing new opportunities for education and community engagement.
The PteridoPortal: A publicly accessible collection of over three million records of extant and extinct pteridophytes
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- Title
- The PteridoPortal: A publicly accessible collection of over three million records of extant and extinct pteridophytes
- Creators
- Carl J. Rothfels - Utah State UniversityJaemin Lee - University of California Museum of PaleontologyMichael A. Sundue - Royal Botanic Garden EdinburghAlan R. Smith - University of California, BerkeleyAmy Kasameyer - University of California, BerkeleyJoyce Gross - University of California, BerkeleyGarth Holman - University of MichiganShusheng Hu - Robert S. Peabody Museum of ArchaeologyMatt von Konrat - Field Museum of Natural HistoryEmily B. Sessa - New York Botanical GardenKimberly Watson - New York Botanical GardenAlan Weakley - University of North Carolina at Chapel HillLibing Zhang - Missouri Botanical GardenPatricia Gensel - University of North Carolina at Chapel HillMichael Hassler - WorldPlants Weiherbergstr. 77 Bruchsal D 76646 GermanyKatelin D. Pearson - American Museum of Natural HistoryEd Gilbert - American Museum of Natural HistoryRobyn J. Burnham - University of MichiganRichard K. Rabeler - University of MichiganPatrick Sweeney - Robert S. Peabody Museum of ArchaeologyAlejandra Vasco - Botanical Research Institute of TexasWeston Testo - Botanical Research Institute of TexasDavid E. Giblin - Burke Museum of Natural History and CultureStefanie M. Ickert-Bond - University of Alaska FairbanksMargaret Landis - University of OklahomaMelanie Link-Perez - University of Wisconsin SystemTatyana Livshultz - Drexel UniversityIan Miller - National Geographic SocietyChristopher Neefus - University of New HampshireKathleen Pigg - Arizona State UniversityMitchell Power - Natural History Museum of UtahAlan Prather - Michigan State UniversityTiana Rehman - Botanical Research Institute of TexasLena Struwe - Rutgers, The State University of New JerseyMichael Vincent - Miami UniversityGeorge Weiblen - University of MinnesotaTimothy Whitfeld - University of MinnesotaMichael D. Windham - Duke UniversityGeorge Yatskievych - The University of Texas at AustinAaron Liston - Oregon State UniversityElizabeth Makings - Arizona State UniversityKathleen M. Pryer - Duke UniversityCaroline Strömberg - University of WashingtonEve Atri - Field Museum of Natural HistoryJason Best - Botanical Research Institute of TexasIan Glasspool - Field Museum of Natural HistoryLayne Huiet - Duke UniversityElizabeth Johnson - Northern Arizona UniversityMegan R. King - Rutgers, The State University of New JerseyAz Klymiuk - University of ManitobaRichard Lupia - University of OklahomaLucas C. Majure - Florida Museum of Natural HistoryCarol Ann McCormick - University of North Carolina at Chapel HillRichard McCourt - Drexel UniversityShanna Oberreiter - University of North Carolina at Chapel HillKent D. Perkins - Florida Museum of Natural HistoryYarency Rodriguez - Field Museum of Natural HistoryChelsea Smith - Drexel UniversityJames Solomon - Missouri Botanical GardenJordan Teisher - Missouri Botanical GardenDonna Ford-Werntz - West Virginia UniversityPetra Fuehrding-Potschkat - University of Alaska FairbanksHolly Little - Smithsonian InstitutionTom A. Ranker - University of Hawaiʻi at MānoaEric Schuettpelz - National Museum of Natural HistoryCarrie M. Tribble - Burke Museum of Natural History and CultureDiane M. Erwin - Museum of Vertebrate ZoologyCindy V. Looy - University of California, Berkeley
- Publication Details
- Applications in plant sciences, v 13(2), e70003
- Publisher
- Wiley
- Number of pages
- 10
- Grant note
- National Science Foundation's (NSF) Advancing Digitization of Biodiversity Collections (ADBC) program: 1802134, 1802239, 1802255, 1802270, 1802305, 1802352, 1802504 NSF: 2330409, 2027654 University of California Museum of PaleontologySmithsonian National Museum of Natural History (US, NMNH)Naturalis Biodiversity CenterETH ZurichWest Virginia University (WVA)Royal Ontario Museum
The authors thank the National Science Foundation's (NSF) Advancing Digitization of Biodiversity Collections (ADBC) program (awards 1802033, 1802134, 1802239, 1802255, 1802270, 1802305, 1802352, and 1802504) for supporting the PCC. FOCO is supported by NSF awards 2045319 and 2330409. The Symbiota Support Hub (NSF award 2027654) is instrumental in the ongoing maintenance and growth of the PteridoPortal. The Berkeley Natural History Museums, and specifically the UC/JEPS Herbaria and the University of California Museum of Paleontology, hosts and administers the PCC. Finally, we thank the following organizations and institutions, which were not funded through the PCC project, for providing their biodiversity data for dissemination via the PteridoPortal: iNaturalist, Royal Botanical Garden Edinburgh (E), Smithsonian National Museum of Natural History (US, NMNH), California Botanic Garden Herbarium (CalBG-RSA), Connecticut Botanical Society Herbarium (YPM-NCBS), Daniel D. Palmer Pteridophytes Collection (HAW-DDP), Fundacion Jardin Botanico Joaquin Antonio Uribe de Medellin (JAUM), Museo del Fin del Mundo (MFM-Pt), National Tropical Botanical Garden (PTBG), Naturalis Biodiversity Center (L), contributing collections to SEINet, Margaret H. Fulford Herbarium (CINC), United Herbaria of the University and ETH Zurich (Z, ZT), Ronald L. McGregor Herbarium (KANU), University of Louisiana at Monroe Herbarium (NLU), A.C. Moore Herbarium (USCH), Vanderbilt University Herbarium (VDB), West Virginia University (WVA), and Royal Ontario Museum (ROM-ROMIP). This is University of California Museum of Paleontology Contribution No. 3016.
- Resource Type
- Journal article
- Language
- English
- Academic Unit
- Biodiversity, Earth, and Environmental Science (BEES); Academy of Natural Sciences of Drexel University
- Web of Science ID
- WOS:001440934600001
- Scopus ID
- 2-s2.0-105003809838
- Other Identifier
- 991022040297104721
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- Collaboration types
- Domestic collaboration
- International collaboration
- Web of Science research areas
- Plant Sciences