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Utilizing Mechanistic Cross-Linking Technology To Study Protein–Protein Interactions: An Experiment Designed for an Undergraduate Biochemistry Lab
Journal article   Open access   Peer reviewed

Utilizing Mechanistic Cross-Linking Technology To Study Protein–Protein Interactions: An Experiment Designed for an Undergraduate Biochemistry Lab

Kara Finzel, Joris Beld, Michael D Burkart and Louise K Charkoudian
Journal of chemical education, v 94(3), pp 375-379
14 Mar 2017
PMID: 29255327
url
https://europepmc.org/articles/pmc5731787View
Accepted (AM)Open Access (License Unspecified) Open

Abstract

Hands-On Learning/Manipulatives Upper-Division Undergraduate Laboratory Instruction Proteins/Peptides Interdisciplinary/Multidisciplinary Biochemistry Undergraduate Research Bioorganic Chemistry
Over the past decade, mechanistic cross-linking probes have been used to study protein–protein interactions in natural product biosynthetic pathways. This approach is highly interdisciplinary, combining elements of protein biochemistry, organic chemistry, and computational docking. Herein, we described the development of an experiment to engage undergraduate students in multidisciplinary research that leverages mechanistic cross-linking probes to study protein conformations and protein–protein interactions. This experiment provides students with a platform to learn chemoenzymatic synthesis, polyacrylamide gel electrophoresis, biochemical assays, and computational docking, all while exploring a contemporary biochemical topic.

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Collaboration types
Domestic collaboration
Web of Science research areas
Chemistry, Multidisciplinary
Education, Scientific Disciplines
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